Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin-ia immunity protein colicin ia immunity protein | SAMEA3472110_05804 | Not Available | Positive | 5787778 - 5788113 | 13269.4 |
| colicin protein | SAMEA3472110_05805 | Not Available | Negative | 5788135 - 5789943 | 66857.9 |
| transposase, is26 | SAMEA3472110_05806 | Not Available | Negative | 5790005 - 5790136 | 4856.99 |
| colicin-e1 protein | SAMEA3472110_05817 | Not Available | Negative | 5797334 - 5798902 | 57238.9 |
| entry exclusion protein 1 | SAMEA3472110_05818 | Not Available | Positive | 5799162 - 5799599 | 17432.6 |
| putative lipoprotein | SAMEA3472110_05819 | Not Available | Positive | 5799680 - 5800099 | 15757.6 |
| mobilization protein moba | SAMEA3472110_05820 | Not Available | Negative | 5800310 - 5801884 | 58639.6 |
| mobilization protein mobc | SAMEA3472110_05821 | Not Available | Negative | 5801874 - 5802212 | 12557.4 |
| regulatory protein rop | SAMEA3472110_05822 | Not Available | Positive | 5802262 - 5802453 | 7228.43 |
| putative colicin lysis protein | SAMEA3472110_05824 | Not Available | Negative | 5803480 - 5803617 | 4828.97 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





