Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3472110_05794 | Not Available | Positive | 5780512 - 5781219 | 25768.2 |
| tnia protein | SAMEA3472110_05795 | Not Available | Positive | 5781294 - 5782562 | 46749.6 |
| putative 60 kda chaperonin | SAMEA3472110_05796 | Not Available | Negative | 5782809 - 5783117 | 10910.9 |
| putative plasmid partitioning protein | SAMEA3472110_05797 | Not Available | Negative | 5783204 - 5783848 | 23348.4 |
| resolvase | SAMEA3472110_05798 | Not Available | Negative | 5784028 - 5784816 | 29129.7 |
| uncharacterised protein | SAMEA3472110_05799 | Not Available | Negative | 5784813 - 5785502 | 25394.5 |
| uncharacterised protein | SAMEA3472110_05800 | Not Available | Negative | 5785495 - 5785734 | 8944.27 |
| uncharacterised protein | SAMEA3472110_05801 | Not Available | Positive | 5786437 - 5786694 | 9959.83 |
| uncharacterised protein | SAMEA3472110_05802 | Not Available | Positive | 5786694 - 5787284 | 21504.9 |
| uncharacterised protein | SAMEA3472110_05803 | Not Available | Negative | 5787302 - 5787649 | 13420.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





