Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ethidium bromide resistance protein | SAMEA3472110_05736 | Not Available | Positive | 5733985 - 5734317 | 11573.6 |
| transposase | SAMEA3472110_05737 | Not Available | Negative | 5734564 - 5735139 | 21450.8 |
| dihydropteroate synthase | SAMEA3472110_05738 | Not Available | Negative | 5735497 - 5736288 | 28900.0 |
| uncharacterised protein | SAMEA3472110_05739 | Not Available | Negative | 5736379 - 5736627 | 9538.65 |
| dephospho-coa kinase/protein folding accessory domain-containing protein | SAMEA3472110_05740 | Not Available | Negative | 5736757 - 5737002 | 9317.42 |
| clavaldehyde dehydrogenase | SAMEA3472110_05741 | Not Available | Negative | 5737040 - 5737903 | 31479.7 |
| uncharacterised protein | SAMEA3472110_05742 | Not Available | Negative | 5737916 - 5738032 | 4083.21 |
| h+ antiporter protein | SAMEA3472110_05743 | Not Available | Negative | 5738049 - 5738303 | 9290.86 |
| lipoprotein | SAMEA3472110_05744 | Not Available | Positive | 5738649 - 5739596 | 35322.9 |
| uncharacterised protein | SAMEA3472110_05745 | Not Available | Negative | 5739809 - 5740066 | 9514.17 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





