Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose operon repressor | SAMEA3472110_05696 | Not Available | Positive | 5694452 - 5695444 | 36614.1 |
| major facilitator superfamily protein | SAMEA3472110_05697 | Not Available | Negative | 5695410 - 5696837 | 51464.9 |
| gntr family transcriptional regulator | SAMEA3472110_05698 | Not Available | Negative | 5696860 - 5697552 | 26135.6 |
| glycosyl transferase family protein | SAMEA3472110_05699 | Not Available | Positive | 5698313 - 5698483 | 6305.89 |
| transposase | SAMEA3472110_05700 | Not Available | Positive | 5698733 - 5698990 | 9284.03 |
| putative fimbrial protein fanc | SAMEA3472110_05701 | Not Available | Positive | 5699714 - 5700229 | 17527.7 |
| putative fimbrial usher protein fand | SAMEA3472110_05702 | Not Available | Positive | 5700322 - 5702736 | 88661.4 |
| putative fimbrial assembly chaperone fane | SAMEA3472110_05703 | Not Available | Positive | 5702729 - 5703421 | 25812.0 |
| uncharacterised protein | SAMEA3472110_05704 | Not Available | Positive | 5703408 - 5703923 | 18415.2 |
| uncharacterised protein | SAMEA3472110_05705 | Not Available | Positive | 5704221 - 5705123 | 32733.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





