Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phospholipase | SAMEA3472110_05623 | Not Available | Positive | 5611462 - 5612703 | 47592.2 |
| inner membrane protein | SAMEA3472110_05624 | Not Available | Positive | 5612703 - 5613659 | 35832.5 |
| putative n-hydroxyarylamine o-acetyltransferase | SAMEA3472110_05625 | Not Available | Positive | 5614520 - 5615314 | 30308.2 |
| phenazine biosynthesis protein phzf family protein | SAMEA3472110_05626 | Not Available | Negative | 5615410 - 5616303 | 32188.5 |
| respiratory nitrate reductase 2 gamma chain | SAMEA3472110_05627 | Not Available | Negative | 5616382 - 5617062 | 26070.6 |
| respiratory nitrate reductase 2 subunit delta | SAMEA3472110_05628 | Not Available | Negative | 5617059 - 5617754 | 26215.1 |
| respiratory nitrate reductase 2 subunit beta | SAMEA3472110_05629 | Not Available | Negative | 5617754 - 5619298 | 58548.1 |
| respiratory nitrate reductase 2 alpha chain | SAMEA3472110_05630 | Not Available | Negative | 5619295 - 5623035 | 140108.0 |
| nitrite extrusion protein 2 | SAMEA3472110_05631 | Not Available | Negative | 5623130 - 5624518 | 49883.1 |
| putative type iii effector protein (leucine rich repeat protein) | SAMEA3472110_05632 | Not Available | Negative | 5624830 - 5625168 | 13068.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





