Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase small subunit | SAMEA3472110_04408 | Not Available | Positive | 4478315 - 4479454 | 41887.5 |
| Attr | Not Available | Not Available | Positive | 4478695 - 4478708 | Not Available |
| Putative terminase large subunit | SAMEA3472110_04409 | Not Available | Positive | 4479444 - 4480772 | 50034.7 |
| phage-associated protein, hi1409 family | SAMEA3472110_04410 | Not Available | Positive | 4480792 - 4482228 | 53663.1 |
| uncharacterised protein | SAMEA3472110_04411 | Not Available | Positive | 4482173 - 4483006 | 32200.5 |
| Putative tail fiber | SAMEA3472110_04412 | Not Available | Positive | 4482987 - 4484309 | 48444.7 |
| Regulatory protein cro | SAMEA3472110_04741 | Not Available | Negative | 4807365 - 4807619 | 9211.13 |
| Attl | Not Available | Not Available | Positive | 4807534 - 4807545 | Not Available |
| Regulatory protein ci | SAMEA3472110_04742 | Not Available | Positive | 4807699 - 4808118 | 16166.3 |
| Hypothetical protein | SAMEA3472110_04743 | Not Available | Positive | 4808335 - 4808571 | 8552.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





