Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound atp synthase | SAMEA3472110_05572 | Not Available | Negative | 5554715 - 5555134 | 15069.2 |
| atp synthase subunit beta | SAMEA3472110_05573 | Not Available | Negative | 5555155 - 5556537 | 50328.5 |
| membrane-bound atp synthase f1 sector gamma-subunit | SAMEA3472110_05574 | Not Available | Negative | 5556564 - 5557427 | 31579.3 |
| atp synthase subunit alpha | SAMEA3472110_05575 | Not Available | Negative | 5557478 - 5559019 | 55225.4 |
| atp synthase subunit delta | SAMEA3472110_05576 | Not Available | Negative | 5559032 - 5559565 | 19333.3 |
| membrane-bound atp synthase f0 sector subunit b | SAMEA3472110_05577 | Not Available | Negative | 5559580 - 5560050 | 17264.9 |
| membrane-bound atp synthase f0 sector subunit c | SAMEA3472110_05578 | Not Available | Negative | 5560112 - 5560351 | 8256.71 |
| membrane-bound atp synthase f0 sector subunit a | SAMEA3472110_05579 | Not Available | Negative | 5560398 - 5561213 | 30314.1 |
| f0f1 atp synthase subunit i | SAMEA3472110_05580 | Not Available | Negative | 5561222 - 5561602 | 13632.5 |
| glucose inhibited division protein | SAMEA3472110_05581 | Not Available | Negative | 5562219 - 5562842 | 23429.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





