Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SAMEA3472110_05548 | Not Available | Positive | 5536624 - 5536809 | 6840.53 |
| uncharacterized protein conserved in bacteria | SAMEA3472110_05549 | Not Available | Positive | 5536817 - 5537143 | 11921.5 |
| uncharacterised protein | SAMEA3472110_05550 | Not Available | Positive | 5537125 - 5537262 | 5029.12 |
| dna-binding transcriptional repressor of phenylacetic acid degradation, aryl-coa responsive | SAMEA3472110_05551 | Not Available | Positive | 5537405 - 5537674 | 9888.02 |
| phenylacetic acid degradation protein | SAMEA3472110_05552 | Not Available | Positive | 5537656 - 5538246 | 21335.8 |
| uncharacterised protein | SAMEA3472110_05554 | Not Available | Positive | 5539020 - 5539271 | 9297.11 |
| fertility inhibition protein | SAMEA3472110_05556 | Not Available | Positive | 5539816 - 5540901 | 42296.1 |
| conjugal transfer protein | SAMEA3472110_05558 | Not Available | Positive | 5541208 - 5542416 | 46020.0 |
| conjugal transfer protein, trbb | SAMEA3472110_05559 | Not Available | Positive | 5542435 - 5543505 | 39533.4 |
| conjugal transfer protein, trbc | SAMEA3472110_05560 | Not Available | Positive | 5543498 - 5545789 | 86914.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





