Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tail fiber assembly protein | SAMEA3472110_05537 | Not Available | Positive | 5522459 - 5523007 | 21348.2 |
| putative phage tail fiber protein | SAMEA3472110_05538 | Not Available | Positive | 5523031 - 5525025 | 70992.7 |
| putative phage tail fiber protein | SAMEA3472110_05539 | Not Available | Positive | 5525022 - 5525588 | 21196.8 |
| putative universal stress protein | SAMEA3472110_05540 | Not Available | Negative | 5526128 - 5526562 | 15959.4 |
| outer membrane protein n (porin) | SAMEA3472110_05541 | Not Available | Negative | 5526703 - 5527836 | 41207.9 |
| pyruvate-flavodoxin oxidoreductase | SAMEA3472110_05543 | Not Available | Negative | 5528197 - 5531721 | 128928.0 |
| protein | SAMEA3472110_05544 | Not Available | Positive | 5531995 - 5532261 | 8669.41 |
| heat-inducible protein | SAMEA3472110_05545 | Not Available | Negative | 5532258 - 5532680 | 15148.5 |
| d-lactate dehydrogenase | SAMEA3472110_05546 | Not Available | Negative | 5532791 - 5533780 | 36522.8 |
| protein | SAMEA3472110_05547 | Not Available | Positive | 5533988 - 5536627 | 96954.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





