Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer system protein | SAMEA3472110_05517 | Not Available | Positive | 5509570 - 5510232 | 25731.0 |
| signal peptide peptidase | SAMEA3472110_05518 | Not Available | Positive | 5510243 - 5511424 | 42894.8 |
| nuclease-related domain | SAMEA3472110_05519 | Not Available | Positive | 5511426 - 5512157 | 27915.3 |
| uncharacterised protein | SAMEA3472110_05520 | Not Available | Positive | 5512184 - 5512306 | 4408.77 |
| uncharacterised protein | SAMEA3472110_05521 | Not Available | Negative | 5512444 - 5512797 | 13167.9 |
| uncharacterised protein | SAMEA3472110_05522 | Not Available | Negative | 5512863 - 5513147 | 10602.8 |
| uncharacterised protein | SAMEA3472110_05523 | Not Available | Negative | 5513504 - 5513806 | 9938.75 |
| uncharacterised protein | SAMEA3472110_05524 | Not Available | Negative | 5514239 - 5514607 | 14010.2 |
| uncharacterised protein | SAMEA3472110_05525 | Not Available | Negative | 5514772 - 5515308 | 19608.2 |
| uncharacterised protein | SAMEA3472110_05526 | Not Available | Negative | 5515376 - 5515813 | 16866.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





