Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fidl-like protein | SAMEA3472110_05507 | Not Available | Positive | 5500618 - 5501100 | 18733.6 |
| small stress response protein | SAMEA3472110_05508 | Not Available | Negative | 5501133 - 5501273 | 5619.0 |
| uncharacterised protein | SAMEA3472110_05509 | Not Available | Negative | 5501249 - 5501674 | 16257.5 |
| uncharacterised protein | SAMEA3472110_05510 | Not Available | Positive | 5501853 - 5501948 | 3666.52 |
| uncharacterised protein | SAMEA3472110_05511 | Not Available | Positive | 5502104 - 5502595 | 18636.7 |
| type iii secretion-associated chaperone | SAMEA3472110_05512 | Not Available | Positive | 5502821 - 5503312 | 18925.9 |
| putative invasion genes regulator | SAMEA3472110_05513 | Not Available | Positive | 5503647 - 5504693 | 40119.9 |
| conjugative transfer system protein | SAMEA3472110_05514 | Not Available | Positive | 5505050 - 5506390 | 49392.4 |
| conjugative coupling factor | SAMEA3472110_05515 | Not Available | Positive | 5506390 - 5508474 | 78142.3 |
| uncharacterised protein | SAMEA3472110_05516 | Not Available | Positive | 5508474 - 5509583 | 42600.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





