Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_05450 | Not Available | Positive | 5444957 - 5445574 | 23209.9 |
| uncharacterised protein | SAMEA3472110_05451 | Not Available | Positive | 5445724 - 5446080 | 13447.2 |
| uncharacterised protein | SAMEA3472110_05452 | Not Available | Positive | 5446331 - 5446501 | 6179.27 |
| tail fiber protein | SAMEA3472110_05453 | Not Available | Positive | 5446914 - 5447993 | 36999.5 |
| Trna-ser | Not Available | Not Available | Positive | 5449026 - 5449113 | Not Available |
| hydrogenase 1, small subunit | SAMEA3472110_05456 | Not Available | Positive | 5449540 - 5450658 | 40683.6 |
| hydrogenase-1 large subunit | SAMEA3472110_05457 | Not Available | Positive | 5450655 - 5452448 | 66301.1 |
| ni/fe-hydrogenase 1 b-type cytochrome subunit | SAMEA3472110_05458 | Not Available | Positive | 5452467 - 5453174 | 27598.8 |
| hydrogenase 1 maturation protease | SAMEA3472110_05459 | Not Available | Positive | 5453171 - 5453758 | 21522.7 |
| hydrogenase-1 operon protein | SAMEA3472110_05460 | Not Available | Positive | 5453755 - 5454153 | 14890.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





