Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_05394 | Not Available | Negative | 5397888 - 5398088 | 7863.54 |
| putative dna-binding protein | SAMEA3472110_05395 | Not Available | Negative | 5398106 - 5399161 | 39482.0 |
| replication initiation protein repa | SAMEA3472110_05396 | Not Available | Positive | 5399638 - 5400513 | 33238.4 |
| uncharacterised protein | SAMEA3472110_05397 | Not Available | Positive | 5400939 - 5401139 | 7681.09 |
| htdz | SAMEA3472110_05398 | Not Available | Positive | 5401662 - 5402015 | 12331.5 |
| nucleoid occlusion protein | SAMEA3472110_05424 | Not Available | Negative | 5420885 - 5421481 | 22837.7 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMEA3472110_05425 | Not Available | Negative | 5421588 - 5422046 | 16288.7 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase | SAMEA3472110_05426 | Not Available | Negative | 5422024 - 5423244 | 43454.7 |
| dna repair protein radc | SAMEA3472110_05427 | Not Available | Positive | 5423416 - 5424084 | 25259.9 |
| 50s ribosomal protein l28 | SAMEA3472110_05428 | Not Available | Positive | 5424301 - 5424537 | 9007.02 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





