Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aec78 | SAMEA3472110_05364 | Not Available | Positive | 5370284 - 5370595 | 11543.8 |
| protein of uncharacterised function (duf3085) | SAMEA3472110_05365 | Not Available | Positive | 5370600 - 5371091 | 17954.3 |
| uncharacterised protein | SAMEA3472110_05366 | Not Available | Positive | 5371171 - 5371464 | 10789.1 |
| uncharacterised protein | SAMEA3472110_05367 | Not Available | Positive | 5371902 - 5372126 | 8176.49 |
| uncharacterised protein | SAMEA3472110_05368 | Not Available | Positive | 5372166 - 5372366 | 7341.87 |
| uncharacterised protein | SAMEA3472110_05369 | Not Available | Positive | 5372589 - 5372900 | 11668.2 |
| uncharacterised protein | SAMEA3472110_05370 | Not Available | Positive | 5373275 - 5373556 | 10577.9 |
| uncharacterised protein | SAMEA3472110_05371 | Not Available | Positive | 5373772 - 5374377 | 22835.6 |
| transposase subunit | SAMEA3472110_05372 | Not Available | Positive | 5374710 - 5375231 | 19694.1 |
| is150 protein insab | SAMEA3472110_05373 | Not Available | Positive | 5375228 - 5376079 | 33461.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





