Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bfpm-like protein | SAMEA3472110_05295 | Not Available | Positive | 5322725 - 5323225 | 18747.3 |
| transposase | SAMEA3472110_05296 | Not Available | Negative | 5323107 - 5323355 | 9217.79 |
| transposase | SAMEA3472110_05297 | Not Available | Positive | 5323409 - 5323834 | 15987.0 |
| is66 transposase | SAMEA3472110_05298 | Not Available | Positive | 5323831 - 5323920 | 3290.01 |
| uncharacterised protein | SAMEA3472110_05299 | Not Available | Negative | 5324134 - 5324316 | 6986.38 |
| transposase, is26 | SAMEA3472110_05339 | Not Available | Positive | 5351328 - 5351459 | 4887.09 |
| uncharacterised protein | SAMEA3472110_05340 | Not Available | Negative | 5351493 - 5351675 | 6620.25 |
| putative periplasmic protein | SAMEA3472110_05341 | Not Available | Positive | 5352236 - 5354626 | 86440.7 |
| uncharacterised protein | SAMEA3472110_05342 | Not Available | Positive | 5355061 - 5355531 | 17692.0 |
| putative plasmid maintenance protein | SAMEA3472110_05343 | Not Available | Positive | 5355581 - 5355877 | 11657.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





