Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aryl-alcohol dehydrogenase (nadp(+)) | SAMEA3472110_05254 | Not Available | Positive | 5277075 - 5278094 | 37888.1 |
| putative lipoprotein | SAMEA3472110_05255 | Not Available | Positive | 5278225 - 5278935 | 27224.7 |
| putative carboxymuconolactone decarboxylase | SAMEA3472110_05256 | Not Available | Positive | 5278951 - 5279754 | 28734.2 |
| fimbrial protein | SAMEA3472110_05257 | Not Available | Positive | 5280857 - 5281420 | 19145.6 |
| fimbrial chaperone | SAMEA3472110_05258 | Not Available | Positive | 5281783 - 5282493 | 26107.7 |
| fimbrial outer membrane usher protein | SAMEA3472110_05259 | Not Available | Positive | 5282535 - 5285186 | 96654.3 |
| putative fimbrial fimf precursor | SAMEA3472110_05260 | Not Available | Positive | 5285200 - 5285730 | 18935.6 |
| fimbrial protein | SAMEA3472110_05261 | Not Available | Positive | 5285743 - 5286246 | 18175.5 |
| fimbrial adhesin | SAMEA3472110_05262 | Not Available | Positive | 5286306 - 5287220 | 32042.4 |
| putative molybdopterin-binding oxidoreductase | SAMEA3472110_05263 | Not Available | Positive | 5287553 - 5289832 | 83459.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





