Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yacb | SAMEA3472110_05223 | Not Available | Negative | 5255525 - 5255806 | 10894.2 |
| yaca | SAMEA3472110_05224 | Not Available | Negative | 5255803 - 5256072 | 10253.2 |
| is21 family transposase | SAMEA3472110_05225 | Not Available | Positive | 5256339 - 5257511 | 45841.9 |
| putative transposase | SAMEA3472110_05226 | Not Available | Positive | 5257511 - 5257945 | 16582.4 |
| isrso11-transposase orfa protein | SAMEA3472110_05227 | Not Available | Positive | 5257952 - 5258458 | 19378.7 |
| is150 conserved protein insb | SAMEA3472110_05228 | Not Available | Positive | 5258434 - 5259297 | 33784.0 |
| heat-stable enterotoxin st-ia/st-p precursor | SAMEA3472110_05229 | Not Available | Negative | 5259487 - 5259705 | 8075.75 |
| transposase | SAMEA3472110_05230 | Not Available | Positive | 5260213 - 5260401 | 7380.18 |
| is91, orf2 | SAMEA3472110_05231 | Not Available | Positive | 5260933 - 5261298 | 13767.2 |
| transposase | SAMEA3472110_05232 | Not Available | Positive | 5261298 - 5262485 | 46444.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





