Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna single-strand annealing protein | SAMEA3472110_04376 | Not Available | Negative | 4459508 - 4460560 | 39577.0 |
| Exodeoxyribonuclease viii | SAMEA3472110_04377 | Not Available | Negative | 4460572 - 4463718 | 117963.0 |
| putative bacteriophage protein | SAMEA3472110_04378 | Not Available | Negative | 4463820 - 4464095 | 9903.06 |
| Hypothetical protein | SAMEA3472110_04379 | Not Available | Negative | 4464170 - 4464334 | 6344.81 |
| phage protein | SAMEA3472110_04380 | Not Available | Negative | 4464300 - 4464536 | 8615.3 |
| uncharacterised protein | SAMEA3472110_04381 | Not Available | Negative | 4464685 - 4464957 | 10295.0 |
| Hypothetical protein | SAMEA3472110_04383 | Not Available | Negative | 4465380 - 4465532 | 5632.7 |
| ydag | SAMEA3472110_04384 | Not Available | Negative | 4465544 - 4465678 | 5242.19 |
| Putative repressor protein | SAMEA3472110_04385 | Not Available | Negative | 4465914 - 4466378 | 17847.6 |
| Putative transcriptional regulator | SAMEA3472110_04386 | Not Available | Positive | 4466483 - 4466758 | 9993.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





