Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved putative protein | SAMEA3472110_05203 | Not Available | Negative | 5241245 - 5241478 | 9074.63 |
| single-stranded dna-binding protein | SAMEA3472110_05204 | Not Available | Negative | 5241534 - 5242064 | 19556.0 |
| yubn | SAMEA3472110_05205 | Not Available | Positive | 5242129 - 5242632 | 18197.7 |
| adenine-specific dna methylase | SAMEA3472110_05206 | Not Available | Negative | 5242896 - 5243459 | 21106.8 |
| domain of uncharacterised function (duf3560) | SAMEA3472110_05207 | Not Available | Negative | 5243506 - 5244867 | 51889.3 |
| uncharacterised protein | SAMEA3472110_05208 | Not Available | Negative | 5244919 - 5245149 | 8582.57 |
| plasmid protein | SAMEA3472110_05209 | Not Available | Negative | 5246180 - 5246371 | 7279.76 |
| ycja | SAMEA3472110_05210 | Not Available | Negative | 5246368 - 5246790 | 15695.7 |
| putative antirestriction protein | SAMEA3472110_05211 | Not Available | Negative | 5246837 - 5247262 | 16353.4 |
| uncharacterised protein | SAMEA3472110_05212 | Not Available | Negative | 5247512 - 5247676 | 5380.64 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





