Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence protein | SAMEA3472110_05115 | Not Available | Positive | 5155687 - 5156679 | 38277.7 |
| nucleoside triphosphate hydrolase domain | SAMEA3472110_05116 | Not Available | Negative | 5156676 - 5158334 | 63560.9 |
| aquaporin z | SAMEA3472110_05117 | Not Available | Positive | 5158760 - 5159455 | 23703.2 |
| transporter | SAMEA3472110_05118 | Not Available | Positive | 5159939 - 5160838 | 32380.3 |
| hydroxylamine reductase | SAMEA3472110_05119 | Not Available | Positive | 5160982 - 5162634 | 60079.3 |
| hcp oxidoreductase, nadh-dependent | SAMEA3472110_05120 | Not Available | Positive | 5162646 - 5163614 | 35729.8 |
| pyruvate oxidase | SAMEA3472110_05121 | Not Available | Positive | 5163747 - 5165465 | 61984.9 |
| low specificity l-threonine aldolase | SAMEA3472110_05122 | Not Available | Positive | 5165502 - 5166503 | 36514.9 |
| nad(p)-binding rossmann-fold domain | SAMEA3472110_05123 | Not Available | Positive | 5166514 - 5167944 | 53787.4 |
| nucleotide di-p-sugar epimerase or dehydratase | SAMEA3472110_05124 | Not Available | Positive | 5168043 - 5169056 | 38068.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





