Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | SAMEA3472110_05058 | Not Available | Negative | 5093691 - 5094473 | 28554.5 |
| transcriptional regulator | SAMEA3472110_05059 | Not Available | Positive | 5095159 - 5095980 | 31343.8 |
| fidl-like protein | SAMEA3472110_05060 | Not Available | Positive | 5095985 - 5096476 | 18968.6 |
| rtn-like protein | SAMEA3472110_05061 | Not Available | Negative | 5096578 - 5098188 | 60913.4 |
| putative diguanylate cyclase | SAMEA3472110_05062 | Not Available | Negative | 5098286 - 5099644 | 51718.4 |
| outer membrane protein pgaa | SAMEA3472110_05063 | Not Available | Positive | 5100235 - 5100465 | 8285.82 |
| udp-n-acetylenolpyruvoylglucosamine reductase | SAMEA3472110_05066 | Not Available | Positive | 5100823 - 5101851 | 37888.2 |
| bifunctional protein | SAMEA3472110_05067 | Not Available | Positive | 5101848 - 5102810 | 35261.0 |
| pantothenate kinase | SAMEA3472110_05068 | Not Available | Negative | 5102842 - 5103768 | 35416.6 |
| Trna-thr | Not Available | Not Available | Positive | 5104154 - 5104229 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





