Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein i | SAMEA3472110_04906 | Not Available | Negative | 4949151 - 4949528 | 13902.2 |
| general secretion pathway protein h | SAMEA3472110_04907 | Not Available | Negative | 4949525 - 4950034 | 18512.0 |
| general secretion pathway protein g | SAMEA3472110_04908 | Not Available | Negative | 4950042 - 4950479 | 15925.1 |
| general secretion pathway protein f | SAMEA3472110_04909 | Not Available | Negative | 4950489 - 4951685 | 44321.9 |
| general secretion pathway protein e | SAMEA3472110_04910 | Not Available | Negative | 4951682 - 4953163 | 54599.9 |
| general secretion pathway protein d | SAMEA3472110_04911 | Not Available | Negative | 4953173 - 4955125 | 70678.2 |
| general secretion pathway protein c | SAMEA3472110_04912 | Not Available | Negative | 4955109 - 4955924 | 30152.0 |
| general secretion pathway protein a | SAMEA3472110_04913 | Not Available | Positive | 4956206 - 4957573 | 51345.3 |
| calcium-binding protein required for initiation of chromosome replication | SAMEA3472110_04914 | Not Available | Positive | 4957575 - 4957994 | 15824.7 |
| 30s ribosomal protein s10 | SAMEA3472110_04915 | Not Available | Positive | 4958232 - 4958543 | 11736.3 |
Pathways
835 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





