Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein ydiu | SAMEA3472110_04886 | Not Available | Positive | 4928436 - 4929872 | 54611.3 |
| putative cytoplasmic protein | SAMEA3472110_04887 | Not Available | Negative | 4929876 - 4930067 | 7130.67 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3472110_04888 | Not Available | Negative | 4930199 - 4931245 | 38707.3 |
| pep synthetase regulatory protein | SAMEA3472110_04889 | Not Available | Negative | 4931402 - 4932235 | 31212.7 |
| phosphoenolpyruvate synthase | SAMEA3472110_04890 | Not Available | Positive | 4932568 - 4934946 | 87426.1 |
| short-chain-fatty-acid--coa ligase (acyl-coa synthetase) | SAMEA3472110_04891 | Not Available | Negative | 4935003 - 4936649 | 60824.7 |
| putative ferrodoxin | SAMEA3472110_04892 | Not Available | Negative | 4936706 - 4936999 | 10685.7 |
| putative flavoprotein | SAMEA3472110_04893 | Not Available | Negative | 4936996 - 4938285 | 45841.6 |
| putative electron transfer flavoprotein subunit alpha | SAMEA3472110_04894 | Not Available | Negative | 4938341 - 4939279 | 33875.7 |
| putative electron transfer flavoprotein beta subunit | SAMEA3472110_04895 | Not Available | Negative | 4939380 - 4940063 | 24425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





