Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane-bound metal-dependent hydrolase | SAMEA3472110_04864 | Not Available | Negative | 4908886 - 4909476 | 22351.7 |
| putative phosphatase | SAMEA3472110_04865 | Not Available | Negative | 4909639 - 4910307 | 24330.7 |
| inner membrane protein | SAMEA3472110_04866 | Not Available | Positive | 4910454 - 4910990 | 20368.3 |
| putative kinase | SAMEA3472110_04867 | Not Available | Negative | 4911031 - 4911891 | 32479.4 |
| protein | SAMEA3472110_04868 | Not Available | Negative | 4911997 - 4912287 | 10850.6 |
| 6-phosphofructokinase | SAMEA3472110_04869 | Not Available | Negative | 4912388 - 4913317 | 32448.9 |
| putative outer membrane protein, acid-inducible | SAMEA3472110_04870 | Not Available | Positive | 4913604 - 4914362 | 27599.6 |
| putative transmembrane anchor protein | SAMEA3472110_04871 | Not Available | Negative | 4914415 - 4914522 | 4115.44 |
| putative type iii effector protein (ankyrin repeat protein b) | SAMEA3472110_04872 | Not Available | Negative | 4914689 - 4916587 | 70908.1 |
| threonine trna synthetase | SAMEA3472110_04873 | Not Available | Positive | 4917110 - 4919038 | 74018.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





