Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terw | SAMEA3472110_04822 | Not Available | Positive | 4873529 - 4873996 | 17212.9 |
| uncharacterised protein | SAMEA3472110_04823 | Not Available | Positive | 4874257 - 4874586 | 12292.8 |
| is66 orf2 family protein | SAMEA3472110_04824 | Not Available | Positive | 4874573 - 4874953 | 14943.7 |
| issfl3 orfc | SAMEA3472110_04825 | Not Available | Positive | 4874996 - 4875853 | 31824.6 |
| transposase | SAMEA3472110_04826 | Not Available | Negative | 4875857 - 4877470 | 61352.2 |
| transposase | SAMEA3472110_04827 | Not Available | Negative | 4877501 - 4877851 | 13200.2 |
| putative transposase | SAMEA3472110_04828 | Not Available | Negative | 4877848 - 4878273 | 15853.1 |
| issfl3 orfc | SAMEA3472110_04829 | Not Available | Positive | 4878593 - 4879078 | 18605.6 |
| putative membraneprotein | SAMEA3472110_04831 | Not Available | Positive | 4880611 - 4881282 | 26323.3 |
| 50s ribosomal protein l31 | SAMEA3472110_04833 | Not Available | Negative | 4882595 - 4882858 | 9916.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





