Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terc | SAMEA3472110_04812 | Not Available | Negative | 4863677 - 4864717 | 38395.6 |
| terb | SAMEA3472110_04813 | Not Available | Negative | 4864740 - 4865195 | 16698.0 |
| tera | SAMEA3472110_04814 | Not Available | Negative | 4865218 - 4866375 | 42170.7 |
| terz | SAMEA3472110_04815 | Not Available | Negative | 4866375 - 4866956 | 20923.8 |
| atp-grasp domain-containing protein | SAMEA3472110_04816 | Not Available | Positive | 4867279 - 4868337 | 38842.4 |
| protein of uncharacterised function (duf3706) | SAMEA3472110_04817 | Not Available | Positive | 4868347 - 4869489 | 42008.0 |
| predicted hydrolase (had superfamily) | SAMEA3472110_04818 | Not Available | Positive | 4869482 - 4870255 | 29427.3 |
| putative atp-binding protein | SAMEA3472110_04819 | Not Available | Positive | 4870257 - 4871336 | 39536.8 |
| atp/gtp-binding protein | SAMEA3472110_04820 | Not Available | Positive | 4871336 - 4872292 | 35606.3 |
| uncharacterised protein | SAMEA3472110_04821 | Not Available | Positive | 4872303 - 4873511 | 45329.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





