Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in stress resistance and biofilm formation | SAMEA3472110_04770 | Not Available | Negative | 4829844 - 4830101 | 8815.55 |
| tetr family transcriptional regulator | SAMEA3472110_04771 | Not Available | Positive | 4830264 - 4830974 | 26318.5 |
| surface antigen domain protein | SAMEA3472110_04772 | Not Available | Negative | 4831036 - 4831575 | 18921.6 |
| nadh dehydrogenase | SAMEA3472110_04773 | Not Available | Negative | 4831802 - 4833106 | 47361.6 |
| predicted esterase | SAMEA3472110_04774 | Not Available | Negative | 4833506 - 4834048 | 21227.4 |
| beta-hexosaminidase | SAMEA3472110_04775 | Not Available | Negative | 4834071 - 4835096 | 37604.9 |
| thiamine kinase | SAMEA3472110_04776 | Not Available | Negative | 4835107 - 4835931 | 32409.1 |
| fibronectin-binding protein b | SAMEA3472110_04777 | Not Available | Negative | 4835912 - 4836553 | 22508.0 |
| putative lipoprotein | SAMEA3472110_04778 | Not Available | Negative | 4836567 - 4836944 | 13905.8 |
| purine nucleoside phosphoramidase | SAMEA3472110_04779 | Not Available | Negative | 4836947 - 4837306 | 13242.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





