Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_04725 | Not Available | Negative | 4797019 - 4797123 | 4256.14 |
| conjugative transfer protein | SAMEA3472110_04726 | Not Available | Negative | 4797472 - 4797987 | 18474.3 |
| incf plasmid conjugative transfer protein trbd | SAMEA3472110_04727 | Not Available | Negative | 4797984 - 4798352 | 13090.0 |
| conjugal transfer protein trap | SAMEA3472110_04728 | Not Available | Negative | 4798291 - 4798878 | 21870.6 |
| conjugative transfer protein | SAMEA3472110_04729 | Not Available | Negative | 4798865 - 4800292 | 50462.8 |
| conjugative transfer protein | SAMEA3472110_04730 | Not Available | Negative | 4800292 - 4801020 | 25686.7 |
| conjugative transfer protein | SAMEA3472110_04731 | Not Available | Negative | 4801007 - 4801573 | 21253.6 |
| conjugative transfer protein | SAMEA3472110_04732 | Not Available | Negative | 4801595 - 4801906 | 11904.7 |
| pilin precursor | SAMEA3472110_04733 | Not Available | Negative | 4801911 - 4802273 | 12740.2 |
| conjugal transfer protein tray | SAMEA3472110_04734 | Not Available | Negative | 4802307 - 4802534 | 8769.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





