Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein mdth | SAMEA3472110_04663 | Not Available | Negative | 4736864 - 4738072 | 44266.9 |
| ribosomal-protein-alanine acetyltransferase | SAMEA3472110_04664 | Not Available | Positive | 4738308 - 4738892 | 22689.1 |
| conserved protein, upf0502 family | SAMEA3472110_04665 | Not Available | Positive | 4738903 - 4739550 | 24181.8 |
| putative oxidoreductase | SAMEA3472110_04666 | Not Available | Positive | 4739552 - 4740475 | 33697.4 |
| integral membrane protein mvin | SAMEA3472110_04667 | Not Available | Positive | 4740585 - 4742120 | 55284.8 |
| flagella synthesis protein flgn | SAMEA3472110_04668 | Not Available | Negative | 4742160 - 4742576 | 15853.9 |
| negative regulator of flagellin synthesis (anti-sigma factor) | SAMEA3472110_04669 | Not Available | Negative | 4742581 - 4742874 | 10355.2 |
| flagella basal body p-ring formation protein flga | SAMEA3472110_04670 | Not Available | Negative | 4742950 - 4743609 | 23463.4 |
| flagellar basal-body rod protein flgb | SAMEA3472110_04671 | Not Available | Positive | 4743764 - 4744180 | 15241.1 |
| flagellar basal-body rod protein flgc | SAMEA3472110_04672 | Not Available | Positive | 4744184 - 4744588 | 13958.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





