Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanase-like protein | SAMEA3472110_04653 | Not Available | Positive | 4729550 - 4730602 | 39723.3 |
| protein ycei precursor | SAMEA3472110_04654 | Not Available | Negative | 4730644 - 4731219 | 20931.6 |
| putative cytochrome | SAMEA3472110_04655 | Not Available | Negative | 4731223 - 4731789 | 20678.5 |
| small protein involved in biofilm formation and acid stress response | SAMEA3472110_04656 | Not Available | Negative | 4732050 - 4732163 | 4719.1 |
| n-methyl-l-tryptophan oxidase | SAMEA3472110_04657 | Not Available | Negative | 4732211 - 4733329 | 40995.4 |
| biofilm formation regulatory protein bsss | SAMEA3472110_04658 | Not Available | Negative | 4733444 - 4733698 | 9633.29 |
| damage-inducible protein | SAMEA3472110_04659 | Not Available | Negative | 4733988 - 4734233 | 8949.43 |
| dihydroorotase | SAMEA3472110_04660 | Not Available | Negative | 4734307 - 4735353 | 38814.6 |
| putative lipoprotein | SAMEA3472110_04661 | Not Available | Negative | 4735459 - 4736019 | 20501.0 |
| glutaredoxin | SAMEA3472110_04662 | Not Available | Negative | 4736153 - 4736800 | 24351.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





