Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetracycline repressor protein | SAMEA3472110_04583 | Not Available | Negative | 4660952 - 4661629 | 24416.0 |
| tetracycline efflux protein | SAMEA3472110_04584 | Not Available | Positive | 4661708 - 4662907 | 42243.5 |
| drug/metabolite transporter | SAMEA3472110_04585 | Not Available | Negative | 4662939 - 4663823 | 31150.6 |
| putative transposase | SAMEA3472110_04586 | Not Available | Positive | 4664312 - 4666108 | 67388.6 |
| uncharacterised protein | SAMEA3472110_04587 | Not Available | Positive | 4666218 - 4666568 | 13800.1 |
| uncharacterised protein | SAMEA3472110_04588 | Not Available | Positive | 4666735 - 4667262 | 20321.0 |
| uncharacterised protein | SAMEA3472110_04589 | Not Available | Negative | 4667313 - 4667720 | 15020.7 |
| uncharacterised protein | SAMEA3472110_04590 | Not Available | Negative | 4667750 - 4668028 | 10420.9 |
| uncharacterised protein | SAMEA3472110_04591 | Not Available | Negative | 4668548 - 4668778 | 8596.75 |
| uncharacterised protein | SAMEA3472110_04592 | Not Available | Negative | 4668815 - 4669102 | 10818.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





