Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SAMEA3472110_04563 | Not Available | Positive | 4641089 - 4642030 | 34367.1 |
| transporter permease | SAMEA3472110_04564 | Not Available | Positive | 4642020 - 4642814 | 28683.5 |
| gamma-aminobutyraldehyde dehydrogenase | SAMEA3472110_04565 | Not Available | Positive | 4642836 - 4644260 | 50830.9 |
| putative transferase | SAMEA3472110_04566 | Not Available | Positive | 4644483 - 4645292 | 31112.3 |
| uncharacterised protein | SAMEA3472110_04567 | Not Available | Positive | 4645628 - 4645825 | 7280.92 |
| inner membrane protein | SAMEA3472110_04568 | Not Available | Positive | 4645983 - 4646156 | 6646.44 |
| putative cytoplasmic protein | SAMEA3472110_04569 | Not Available | Positive | 4646242 - 4646475 | 8800.41 |
| inner membrane protein | SAMEA3472110_04570 | Not Available | Negative | 4646476 - 4646925 | 15816.1 |
| acetyltransferase ynca | SAMEA3472110_04571 | Not Available | Negative | 4646925 - 4647440 | 19177.7 |
| putative zinc-binding dehydrogenase | SAMEA3472110_04572 | Not Available | Positive | 4647621 - 4648658 | 37624.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





