Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrichrome transport atp-binding protein | SAMEA3472110_04530 | Not Available | Negative | 4604751 - 4605548 | 28884.3 |
| ferrichrome outer membrane transporter | SAMEA3472110_04531 | Not Available | Negative | 4605599 - 4607122 | 56734.6 |
| membrane associated ctp-phosphosubstrate transferase | SAMEA3472110_04533 | Not Available | Positive | 4607415 - 4608137 | 26349.2 |
| putative hydrolase | SAMEA3472110_04534 | Not Available | Positive | 4608324 - 4609910 | 58974.6 |
| putative enzyme ynbd | SAMEA3472110_04535 | Not Available | Positive | 4609948 - 4611216 | 48841.6 |
| fmn-dependent nadh-azoreductase | SAMEA3472110_04536 | Not Available | Negative | 4611270 - 4611875 | 21729.0 |
| atp-dependent helicase hrpa | SAMEA3472110_04537 | Not Available | Positive | 4612076 - 4615978 | 149012.0 |
| conserved sam-binding protein, duf218 family | SAMEA3472110_04538 | Not Available | Positive | 4616250 - 4617050 | 29694.4 |
| aldehyde dehydrogenase a | SAMEA3472110_04539 | Not Available | Positive | 4617247 - 4618686 | 52235.8 |
| glyceraldehyde-3-phosphate dehydrogenase | SAMEA3472110_04540 | Not Available | Negative | 4618727 - 4619728 | 35763.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





