Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease do precursor | SAMEA3472110_04520 | Not Available | Negative | 4593141 - 4594565 | 49357.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | SAMEA3472110_04521 | Not Available | Negative | 4594695 - 4596212 | 59374.2 |
| mta/sah nucleosidase | SAMEA3472110_04522 | Not Available | Positive | 4596296 - 4596994 | 24385.5 |
| vitamin b12-binding protein | SAMEA3472110_04523 | Not Available | Positive | 4596987 - 4597787 | 29368.4 |
| putative membrane protein yads | SAMEA3472110_04524 | Not Available | Positive | 4597825 - 4598448 | 22129.1 |
| iron-sulfur cluster insertion protein erpa | SAMEA3472110_04525 | Not Available | Negative | 4598495 - 4598839 | 12101.2 |
| h(+)/cl(-) exchange transporter | SAMEA3472110_04526 | Not Available | Negative | 4598921 - 4600342 | 50351.9 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMEA3472110_04527 | Not Available | Positive | 4600567 - 4601847 | 45343.7 |
| ferrichrome transport system permease | SAMEA3472110_04528 | Not Available | Negative | 4601882 - 4603864 | 70382.5 |
| iron-hydroxamate transporter substrate-binding subunit | SAMEA3472110_04529 | Not Available | Negative | 4603861 - 4604751 | 33023.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





