Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMEA3472110_04509 | Not Available | Negative | 4581481 - 4582677 | 43390.5 |
| ribosome recycling factor | SAMEA3472110_04510 | Not Available | Negative | 4582769 - 4583326 | 20639.7 |
| uridylate kinase | SAMEA3472110_04511 | Not Available | Negative | 4583618 - 4584343 | 25971.9 |
| elongation factor ts | SAMEA3472110_04512 | Not Available | Negative | 4584490 - 4585341 | 30424.7 |
| 30s ribosomal protein s2 | SAMEA3472110_04513 | Not Available | Negative | 4585599 - 4586324 | 26745.2 |
| methionine aminopeptidase | SAMEA3472110_04515 | Not Available | Positive | 4586692 - 4587486 | 29332.5 |
| [protein-pii] uridylyltransferase | SAMEA3472110_04516 | Not Available | Positive | 4587548 - 4590220 | 102436.0 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | SAMEA3472110_04517 | Not Available | Positive | 4590251 - 4591075 | 29892.8 |
| putative structural protein | SAMEA3472110_04518 | Not Available | Positive | 4591389 - 4591775 | 15097.0 |
| carbohydrate diacid regulator | SAMEA3472110_04519 | Not Available | Negative | 4591829 - 4592986 | 43660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





