Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptidyl-trna hydrolase | SAMEA3472110_04489 | Not Available | Negative | 4560944 - 4561366 | 15604.9 |
| yaeq family protein | SAMEA3472110_04490 | Not Available | Negative | 4561363 - 4561908 | 20847.7 |
| putative cytoplasmic protein | SAMEA3472110_04491 | Not Available | Positive | 4562074 - 4562274 | 7214.59 |
| rho-binding antiterminator | SAMEA3472110_04492 | Not Available | Positive | 4562261 - 4562521 | 9670.44 |
| trna(ile)-lysidine synthetase | SAMEA3472110_04493 | Not Available | Negative | 4562570 - 4563868 | 48006.7 |
| glyoxylase i family protein | SAMEA3472110_04494 | Not Available | Negative | 4563933 - 4564322 | 14707.4 |
| lysine decarboxylase, constitutive | SAMEA3472110_04495 | Not Available | Negative | 4564379 - 4566520 | 80595.8 |
| acetyl-coa carboxylase | SAMEA3472110_04496 | Not Available | Negative | 4566618 - 4567577 | 35273.6 |
| dna polymerase iii subunit alpha | SAMEA3472110_04497 | Not Available | Negative | 4567590 - 4571072 | 129901.0 |
| ribonuclease hii | SAMEA3472110_04498 | Not Available | Negative | 4571109 - 4571705 | 21569.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





