Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_04479 | Not Available | Positive | 4550616 - 4551176 | 21135.7 |
| d,d-heptose 1,7-bisphosphate phosphatase | SAMEA3472110_04480 | Not Available | Negative | 4552966 - 4553538 | 21125.2 |
| d-methionine abc transporter atp-binding protein | SAMEA3472110_04481 | Not Available | Positive | 4553726 - 4554757 | 37804.7 |
| d-methionine abc transporter permease | SAMEA3472110_04482 | Not Available | Positive | 4554750 - 4555403 | 23257.6 |
| d-methionine-binding transport system metq precursor | SAMEA3472110_04483 | Not Available | Positive | 4555443 - 4556258 | 29405.2 |
| rcsf--phosphorelay glucose and zinc sensor | SAMEA3472110_04484 | Not Available | Positive | 4556376 - 4556780 | 14164.3 |
| methyltransferase | SAMEA3472110_04485 | Not Available | Positive | 4556777 - 4557484 | 26361.8 |
| prolyl-trna synthetase | SAMEA3472110_04486 | Not Available | Positive | 4557595 - 4559313 | 63626.2 |
| putative lipoprotein | SAMEA3472110_04487 | Not Available | Positive | 4559366 - 4560190 | 29900.9 |
| copper homeostasis protein (lipoprotein nlpe) | SAMEA3472110_04488 | Not Available | Negative | 4560220 - 4560930 | 25862.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





