Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| altronate oxidoreductase | SAMEA3472110_04459 | Not Available | Positive | 4526701 - 4528152 | 54809.4 |
| inner membrane protein | SAMEA3472110_04460 | Not Available | Positive | 4528469 - 4529263 | 30034.9 |
| trans-aconitate methyltransferase | SAMEA3472110_04461 | Not Available | Negative | 4529267 - 4530025 | 29010.3 |
| autoinducer-2 (ai-2) modifying protein lsrg | SAMEA3472110_04462 | Not Available | Negative | 4530082 - 4530372 | 11255.4 |
| abc transporter substrate-binding protein | SAMEA3472110_04463 | Not Available | Negative | 4530395 - 4531159 | 27501.2 |
| abc transporter permease | SAMEA3472110_04464 | Not Available | Negative | 4531171 - 4532163 | 34430.5 |
| abc transporter permease | SAMEA3472110_04465 | Not Available | Negative | 4532163 - 4533191 | 36487.2 |
| abc transporter atp-binding protein | SAMEA3472110_04466 | Not Available | Negative | 4533185 - 4534720 | 55640.7 |
| putative sugar-binding regulatory protein | SAMEA3472110_04467 | Not Available | Positive | 4534969 - 4535922 | 33788.9 |
| putative carbohydrate kinase | SAMEA3472110_04468 | Not Available | Positive | 4536001 - 4537593 | 57551.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





