Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMEA3472110_04439 | Not Available | Negative | 4508533 - 4508892 | 12599.0 |
| major facilitator superfamily protein | SAMEA3472110_04440 | Not Available | Negative | 4508915 - 4509370 | 16450.6 |
| amino acid metabolite efflux | SAMEA3472110_04441 | Not Available | Positive | 4509565 - 4510464 | 32397.3 |
| gntr family transcriptional regulator | SAMEA3472110_04442 | Not Available | Negative | 4510509 - 4511207 | 26493.8 |
| cellobiose-specific phosphotransferase enzyme iib component | SAMEA3472110_04443 | Not Available | Positive | 4511406 - 4511717 | 11185.1 |
| pts system transporter subunit iic | SAMEA3472110_04444 | Not Available | Positive | 4511832 - 4513154 | 47749.8 |
| putative phosphotransferase system pts, lactose /cellobiose-specific iia subunit | SAMEA3472110_04445 | Not Available | Positive | 4513186 - 4513425 | 8821.81 |
| carbohydrate-specific outer membrane porin | SAMEA3472110_04446 | Not Available | Positive | 4513481 - 4515154 | 62977.0 |
| 6-phospho-beta-glucosidase | SAMEA3472110_04447 | Not Available | Positive | 4515179 - 4516618 | 55272.5 |
| multiple antibiotic resistance protein | SAMEA3472110_04448 | Not Available | Negative | 4516675 - 4516893 | 7656.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





