Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter, substrate-binding protein | SAMEA3472110_04250 | Not Available | Positive | 4365225 - 4365971 | 27205.6 |
| glutamine transport system permease | SAMEA3472110_04251 | Not Available | Positive | 4366110 - 4366769 | 24423.9 |
| glnq protein, subunit of glutamine abc transporter | SAMEA3472110_04252 | Not Available | Positive | 4366766 - 4367488 | 26733.6 |
| membrane protein ybio | SAMEA3472110_04253 | Not Available | Positive | 4367605 - 4369830 | 81855.4 |
| sam-dependent methyltransferase | SAMEA3472110_04254 | Not Available | Negative | 4369827 - 4370753 | 34182.8 |
| protein involved in colanic acid production | SAMEA3472110_04255 | Not Available | Positive | 4371029 - 4371289 | 8896.65 |
| glutaminyl-trna synthetase | SAMEA3472110_04348 | Not Available | Negative | 4432326 - 4433507 | 44954.8 |
| putative nad-dependent epimerase/dehydratase | SAMEA3472110_04350 | Not Available | Negative | 4433889 - 4434086 | 7183.0 |
| hydrolase | SAMEA3472110_04351 | Not Available | Negative | 4434157 - 4435077 | 33634.2 |
| lysr family transcriptional regulator | SAMEA3472110_04352 | Not Available | Positive | 4435215 - 4436114 | 33467.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





