Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm formation regulatory protein bssr | SAMEA3472110_04220 | Not Available | Negative | 4328646 - 4329029 | 14550.6 |
| radical sam superfamily protein | SAMEA3472110_04221 | Not Available | Positive | 4329242 - 4330567 | 49584.6 |
| uncharacterized protein conserved in bacteria | SAMEA3472110_04222 | Not Available | Positive | 4330793 - 4330936 | 5235.49 |
| putative regulatory protein | SAMEA3472110_04223 | Not Available | Positive | 4331169 - 4331498 | 11982.8 |
| putative signaling protein | SAMEA3472110_04224 | Not Available | Negative | 4331568 - 4332896 | 49915.8 |
| cyclic di-gmp phosphodiesterase | SAMEA3472110_04225 | Not Available | Negative | 4332904 - 4335252 | 90087.7 |
| abc transporter permease | SAMEA3472110_04226 | Not Available | Negative | 4335430 - 4336341 | 33284.3 |
| abc transporter permease | SAMEA3472110_04227 | Not Available | Negative | 4336344 - 4337264 | 34054.5 |
| putative binding protein ylib precursor | SAMEA3472110_04228 | Not Available | Negative | 4337282 - 4338820 | 56431.0 |
| glutathione transporter atp-binding protein | SAMEA3472110_04229 | Not Available | Negative | 4338840 - 4340711 | 69236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





