Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor-type transcriptional regulator | SAMEA3472110_04210 | Not Available | Negative | 4319318 - 4319854 | 20307.6 |
| deor-type transcriptional regulator | SAMEA3472110_04211 | Not Available | Positive | 4319938 - 4321146 | 41913.1 |
| putative hydrolase | SAMEA3472110_04212 | Not Available | Positive | 4321146 - 4321961 | 30295.1 |
| protein | SAMEA3472110_04213 | Not Available | Positive | 4322053 - 4322331 | 9726.86 |
| multidrug translocase mdfa | SAMEA3472110_04214 | Not Available | Negative | 4322372 - 4323604 | 44378.8 |
| putative phosphatase | SAMEA3472110_04215 | Not Available | Positive | 4323889 - 4324485 | 22419.9 |
| deoxyribose operon repressor | SAMEA3472110_04216 | Not Available | Positive | 4324543 - 4325301 | 28549.5 |
| d-alanyl-d-alanine carboxypeptidase | SAMEA3472110_04217 | Not Available | Negative | 4325348 - 4326550 | 43643.4 |
| glutathione s-transferase | SAMEA3472110_04218 | Not Available | Positive | 4326797 - 4327423 | 23742.5 |
| aldose sugar dehydrogenase | SAMEA3472110_04219 | Not Available | Negative | 4327420 - 4328535 | 41069.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





