Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheine adenylyltransferase | SAMEA3472110_04188 | Not Available | Positive | 4302495 - 4302974 | 17895.7 |
| formamidopyrimidine-dna glycosylase | SAMEA3472110_04189 | Not Available | Negative | 4303013 - 4303822 | 30319.8 |
| lipoprotein | SAMEA3472110_04191 | Not Available | Positive | 4304110 - 4304583 | 17311.1 |
| arginine transport system atp-binding protein | SAMEA3472110_04192 | Not Available | Positive | 4304801 - 4305529 | 27023.7 |
| arginine abc transporter, substrate-binding protein | SAMEA3472110_04193 | Not Available | Positive | 4305547 - 4306278 | 26961.0 |
| arginine transport system permease | SAMEA3472110_04194 | Not Available | Positive | 4306285 - 4307001 | 26218.7 |
| arginine abc transporter permease | SAMEA3472110_04195 | Not Available | Positive | 4307001 - 4307669 | 24929.3 |
| arginine/ornithine abc transporter substrate-binding protein | SAMEA3472110_04196 | Not Available | Positive | 4307894 - 4308625 | 26871.9 |
| 23s rrna (uracil-5-)-methyltransferase | SAMEA3472110_04197 | Not Available | Negative | 4308654 - 4309781 | 41959.1 |
| inner membrane protein | SAMEA3472110_04198 | Not Available | Negative | 4309822 - 4310310 | 18519.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





