Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein yibp | SAMEA3472110_04167 | Not Available | Positive | 4281788 - 4283047 | 46528.3 |
| putative polysaccharide deacetylase | SAMEA3472110_04168 | Not Available | Positive | 4283051 - 4284010 | 35424.9 |
| putative glycosyl transferase | SAMEA3472110_04169 | Not Available | Negative | 4283997 - 4285031 | 40447.5 |
| threonine 3-dehydrogenase nad(p)-binding protein | SAMEA3472110_04170 | Not Available | Negative | 4285270 - 4286295 | 37257.3 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMEA3472110_04171 | Not Available | Negative | 4286305 - 4287501 | 43119.5 |
| involved in lipopolysaccharide biosynthesis | SAMEA3472110_04172 | Not Available | Negative | 4287776 - 4288648 | 34039.7 |
| adp-glyceromanno-heptose 6-epimerase rfad | SAMEA3472110_04173 | Not Available | Positive | 4288937 - 4289869 | 34896.0 |
| adp-heptose--lps-heptosyltransferase ii | SAMEA3472110_04174 | Not Available | Positive | 4289879 - 4290925 | 39046.4 |
| lipopolysaccharide heptosyltransferase 1 | SAMEA3472110_04175 | Not Available | Positive | 4290929 - 4291888 | 35504.8 |
| lipid a-core surface polymer ligase waal | SAMEA3472110_04176 | Not Available | Negative | 4291936 - 4293189 | 47430.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





