Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glutathione s-transferase | SAMEA3472110_04147 | Not Available | Negative | 4258123 - 4258731 | 22546.3 |
| hlyd-family secretion protein | SAMEA3472110_04148 | Not Available | Negative | 4258802 - 4259938 | 41990.8 |
| inner membrane protein | SAMEA3472110_04149 | Not Available | Negative | 4259941 - 4260303 | 13866.8 |
| pts system subunit iiabc | SAMEA3472110_04150 | Not Available | Positive | 4260840 - 4262753 | 68004.5 |
| mannitol-1-phosphate 5-dehydrogenase | SAMEA3472110_04151 | Not Available | Positive | 4262848 - 4263996 | 41140.5 |
| mannitol operon repressor | SAMEA3472110_04152 | Not Available | Positive | 4263996 - 4264583 | 21991.4 |
| putative cytoplasmic protein | SAMEA3472110_04153 | Not Available | Negative | 4264595 - 4264804 | 7995.76 |
| putative cytoplasmic protein | SAMEA3472110_04154 | Not Available | Positive | 4265088 - 4265450 | 13696.8 |
| putative lipoprotein | SAMEA3472110_04155 | Not Available | Positive | 4266009 - 4266692 | 25446.9 |
| adhesin | SAMEA3472110_04156 | Not Available | Positive | 4266736 - 4272201 | 181609.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





