Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h | SAMEA3472110_04116 | Not Available | Positive | 4227680 - 4228147 | 17597.9 |
| s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3472110_04117 | Not Available | Negative | 4228144 - 4228866 | 27226.7 |
| hydroxyacylglutathione hydrolase | SAMEA3472110_04118 | Not Available | Positive | 4228900 - 4229655 | 28461.0 |
| membrane-bound lytic murein transglycosylase d | SAMEA3472110_04119 | Not Available | Positive | 4229865 - 4231085 | 44680.6 |
| putative methyltransferase | SAMEA3472110_04120 | Not Available | Negative | 4231132 - 4231902 | 28245.3 |
| endonuclease/exonuclease/phosphatase family protein | SAMEA3472110_04121 | Not Available | Negative | 4231979 - 4232758 | 29128.3 |
| lysr family transcriptional regulator | SAMEA3472110_04122 | Not Available | Positive | 4233020 - 4233934 | 33768.7 |
| 2,5-diketo-d-gluconic acid reductase b | SAMEA3472110_04123 | Not Available | Negative | 4233931 - 4234734 | 29453.4 |
| Trna-asp | Not Available | Not Available | Positive | 4234896 - 4234972 | Not Available |
| electron transport protein ysaa | SAMEA3472110_04126 | Not Available | Negative | 4235316 - 4235789 | 17377.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





