Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_04086 | Not Available | Negative | 4203338 - 4203799 | 16980.8 |
| phage protein | SAMEA3472110_04087 | Not Available | Negative | 4203796 - 4204275 | 17741.3 |
| integrating conjugative element membrane protein, pfl_4697 family | SAMEA3472110_04088 | Not Available | Negative | 4204590 - 4205342 | 28105.6 |
| putative plasmid transfer protein | SAMEA3472110_04089 | Not Available | Negative | 4205335 - 4207431 | 77053.7 |
| uncharacterised protein | SAMEA3472110_04090 | Not Available | Negative | 4207428 - 4208216 | 30150.7 |
| putative restriction endonuclease | SAMEA3472110_04091 | Not Available | Negative | 4208213 - 4208812 | 22445.1 |
| integrating conjugative element protein, family | SAMEA3472110_04092 | Not Available | Negative | 4208809 - 4209327 | 17944.7 |
| putative lytic transglycosylase, catalytic | SAMEA3472110_04093 | Not Available | Negative | 4209324 - 4209986 | 24564.7 |
| integrating conjugative element protein, pfl_4693 family | SAMEA3472110_04094 | Not Available | Negative | 4209965 - 4210684 | 26377.5 |
| uncharacterised protein | SAMEA3472110_04095 | Not Available | Negative | 4210691 - 4211464 | 27649.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





