Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna helicase protein | SAMEA3472110_04043 | Not Available | Negative | 4165864 - 4167378 | 56969.3 |
| ig family protein | SAMEA3472110_04044 | Not Available | Negative | 4167503 - 4170751 | 115319.0 |
| uncharacterised protein | SAMEA3472110_04045 | Not Available | Positive | 4170931 - 4171323 | 14638.6 |
| uncharacterised protein | SAMEA3472110_04046 | Not Available | Negative | 4171330 - 4171986 | 25430.9 |
| uncharacterised protein | SAMEA3472110_04047 | Not Available | Negative | 4171999 - 4172697 | 27246.4 |
| uncharacterised protein | SAMEA3472110_04048 | Not Available | Negative | 4173231 - 4174298 | 40589.1 |
| uncharacterised protein | SAMEA3472110_04049 | Not Available | Negative | 4174306 - 4174761 | 18148.8 |
| thif family protein | SAMEA3472110_04050 | Not Available | Negative | 4174763 - 4176502 | 64789.3 |
| uncharacterised protein | SAMEA3472110_04051 | Not Available | Negative | 4176499 - 4177542 | 39576.7 |
| type i restriction-modification system methyltransferase subunit | SAMEA3472110_04052 | Not Available | Negative | 4177745 - 4178431 | 25782.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





