Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trhc | SAMEA3472110_04033 | Not Available | Negative | 4154906 - 4157587 | 101519.0 |
| trhv | SAMEA3472110_04034 | Not Available | Negative | 4157596 - 4158546 | 33901.1 |
| htdt | SAMEA3472110_04035 | Not Available | Negative | 4158556 - 4159413 | 31588.4 |
| htdv | SAMEA3472110_04036 | Not Available | Negative | 4159427 - 4159909 | 18772.5 |
| putative plasmid transfer protein | SAMEA3472110_04037 | Not Available | Negative | 4159917 - 4161272 | 48515.8 |
| htdo | SAMEA3472110_04038 | Not Available | Negative | 4161262 - 4161723 | 17211.3 |
| trhk | SAMEA3472110_04039 | Not Available | Negative | 4161725 - 4162996 | 45276.6 |
| trhe | SAMEA3472110_04040 | Not Available | Negative | 4162996 - 4163784 | 29314.2 |
| trhl | SAMEA3472110_04041 | Not Available | Negative | 4163796 - 4164056 | 9896.27 |
| helicase/zfx/zfy transcription activation region domain-containing protein | SAMEA3472110_04042 | Not Available | Negative | 4164270 - 4165871 | 58985.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





