Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| htdf | SAMEA3472110_04023 | Not Available | Negative | 4143498 - 4143923 | 15623.9 |
| htda | SAMEA3472110_04024 | Not Available | Negative | 4143913 - 4144365 | 16560.2 |
| parr | SAMEA3472110_04025 | Not Available | Negative | 4144769 - 4145407 | 23618.1 |
| parm | SAMEA3472110_04026 | Not Available | Negative | 4145419 - 4146456 | 38540.6 |
| trho | SAMEA3472110_04027 | Not Available | Positive | 4146820 - 4147767 | 35626.3 |
| uncharacterised protein | SAMEA3472110_04028 | Not Available | Positive | 4147764 - 4148600 | 31311.0 |
| uncharacterised protein | SAMEA3472110_04029 | Not Available | Positive | 4148593 - 4149114 | 19053.0 |
| trhz | SAMEA3472110_04030 | Not Available | Positive | 4149111 - 4149500 | 13996.0 |
| putative plasmid partition protein | SAMEA3472110_04031 | Not Available | Negative | 4149562 - 4150566 | 38388.9 |
| putative plasmid partition protein | SAMEA3472110_04032 | Not Available | Negative | 4150563 - 4151816 | 47036.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





